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Rarity of the “common” coral Pocillopora damicornis in the western Philippine archipelago

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Abstract

Extensive phenotypic plasticity generally confounds identification of the common reef-building coral Pocillopora damicornis. With the recognition of P. damicornis genetic lineages as taxonomic species, this study surveyed genetic lineages within P. damicornis sensu lato (Veron and Pichon in Scleractinia of Eastern Australia, Australian Institute of Marine Science, Australia, 1976) in the Philippines. Employing a PCR–RFLP assay of the mitochondrial control region and sequencing of the mitochondrial open reading frame for lineage identification, we examined 694 P. damicornis s.l. colonies from 16 locations across the Philippine archipelago to characterize Pocillopora species distribution in the region. Genetic identification reveals the occurrence of P. acuta and the absence of P. damicornis in the Philippines. This study highlights the need to revisit the distributional limits of this extensively studied species complex and the necessity of using genetic information for taxonomic identification where morphological identification is unreliable.

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References

  • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410

    Article  CAS  PubMed  Google Scholar 

  • Ayre DJ, Hughes TP, Standish RS (1997) Genetic differentiation, reproductive mode, and gene flow in the brooding coral Pocillopora damicornis along the Great Barrier Reef, Australia. Mar Ecol Prog Ser 159:175–187

    Article  Google Scholar 

  • Cairns SD (1999) Species richness of recent Scleractinia. Atoll Res Bull 459:1–45

    Article  Google Scholar 

  • Flot JF, Magalon H, Cruaud C, Couloux A, Tillier S (2008) Patterns of genetic structure among Hawaiian corals of the genus Pocillopora yield clusters of individuals that are compatible with morphology. C R Biol 331:239–247

    Article  PubMed  Google Scholar 

  • Gaither MR, Szabó Z, Crepeau MW, Bird CE, Toonen RJ (2011) Preservation of corals in salt-saturated DMSO buffer is superior to ethanol for PCR experiments. Coral Reefs 30:329–333

    Article  Google Scholar 

  • Gélin P, Postaire B, Fauvelot C, Magalon H (2017a) Reevaluating species number, distribution and endemism of the coral genus Pocillopora Lamarck, 1816 using species delimitation methods and microsatellites. Mol Phylogenet Evol 109:430–446

    Article  PubMed  Google Scholar 

  • Gélin P, Fauvelot C, Mehn V, Bureau S, Rouzé H, Magalon H (2017b) Superclone expansion, long-distance clonal dispersal and local genetic structuring in the coral Pocillopora damicornis type β in Reunion Island, South Western Indian Ocean. PLoS One 12:e0169692

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Gorospe KD, Karl SA (2013) Genetic relatedness does not retain spatial pattern across multiple spatial scales: dispersal and colonization in the coral Pocillopora damicornis. Mol Ecol 22:3721–3736

    Article  PubMed  Google Scholar 

  • Hoeksema BW, Rogers A, Quibilan MC (2014) Pocillopora damicornis. The IUCN Red List of Threatened Species 2014:e.T133222A54216898

  • Johnston EC, Forsman ZH, Flot JF, Schmidt-Roach S, Pinzón JH, Knapp ISS, Toonen RJ (2017) A genomic glance through the fog of plasticity and diversification in Pocillopora. Sci Rep 7:5991

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Johnston EC, Forsman ZH, Toonen RJ (2018) A simple molecular technique for distinguishing species reveals frequent misidentification of Hawaiian corals in the genus Pocillopora. PeerJ 6:e4355

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Kitano YF, Nagai S, Ueno M, Yasuda N (2015) Most Pocillopora damicornis around Yaeyama Islands are Pocillopora acuta according to mitochondrial ORF sequences. Galaxea 17:21–22

    Article  Google Scholar 

  • Leigh JW, Bryant D (2015) PopART: full-feature software for haplotype network construction. Methods Ecol Evol 6:1110–1116

    Article  Google Scholar 

  • Marti-Puig P, Forsman ZH, Haverkort-Yeh RD, Knapp ISS, Maragos JE, Toonen RJ (2014) Extreme phenotypic polymorphism in the coral genus Pocillopora; micro-morphology corresponds to mitochondrial groups, while colony morphology does not. Bull Mar Sci 90:211–231

    Article  Google Scholar 

  • Mayfield AB, Chen CS, Dempsey AC (2017) Biomarker profiling in reef corals of Tonga’s Ha’apai and Vava’u archipelagos. PLoS ONE 12:e0185857

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Pante E, Puillandre N, Viricel A, Arnaud-Haond S, Aurelle D, Castelin M, Chenuil A, Destombe C, Forcioli D, Valero M, Viard F, Samadi S (2015) Species are hypotheses: avoid connectivity assessments based on pillars of sand. Mol Ecol 24:525–544

    Article  PubMed  Google Scholar 

  • Pinzón JH, LaJeunesse TC (2011) Species delimitation of common reef corals in the genus Pocillopora using nucleotide sequence phylogenies, population genetics and symbiosis ecology. Mol Ecol 20:311–325

    Article  CAS  PubMed  Google Scholar 

  • Pinzón JH, Reyes-Bonilla H, Baums IB, LaJeunesse TC (2012) Contrasting clonal structure among Pocillopora (Scleractinia) communities at two environmentally distinct sites in the Gulf of California. Coral Reefs 31:765–777

    Article  Google Scholar 

  • Pinzón JH, Sampayo E, Cox E, Chauka LJ, Chen CA, Voolstra CR, LaJeunesse TC (2013) Blind to morphology: genetics identifies several widespread ecologically common species and few endemics among Indo-Pacific cauliflower corals (Pocillopora, Scleractinia). J Biogeogr 40:1595–1608

    Article  Google Scholar 

  • Poquita-Du R, Ng C, Loo J, Afiq-Rosli L, Tay Y, Todd P, Chou L, Huang D (2017) New evidence shows that Pocilloporadamicornis-like’ corals in Singapore are actually Pocillopora acuta (Scleractinia: Pocilloporidae). Biodivers Data J 5:e11407

    Article  Google Scholar 

  • Schmidt-Roach S, Lundgren P, Miller JK, Gerlach G, Noreen AME, Andreakis N (2012a) Assessing hidden species diversity in the coral Pocillopora damicornis from Eastern Australia. Coral Reefs 32:161–172

    Article  Google Scholar 

  • Schmidt-Roach S, Miller KJ, Woolsey E, Gerlach G, Baird AH (2012b) Broadcast spawning by Pocillopora species on the Great Barrier Reef. PLoS ONE 7:e50847

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Schmidt-Roach S, Miller KJ, Andreakis N (2013) Pocillopora aliciae: a new species of scleractinian coral (Scleractinia, Pocilloporidae) from subtropical Eastern Australia. Zootaxa 3626:576–582

    Article  PubMed  Google Scholar 

  • Schmidt-Roach S, Miller KJ, Lundgren P, Andreakis N (2014) With eyes wide open: a revision of species within and closely related to the Pocillopora damicornis species complex (Scleractinia; Pocilloporidae) using morphology and genetics. Zool J Linn Soc 170:1–33

    Article  Google Scholar 

  • Smith H, Epstein H, Torda G (2017) The molecular basis of differential morphology and bleaching thresholds in two morphs of the coral Pocillopora acuta. Sci Rep 7:10066

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Torda G, Schmidt-Roach S, Peplow LM, Lundgren P, van Oppen MJH (2013) A rapid genetic assay for the identification of the most common Pocillopora damicornis genetic lineages on the Great Barrier Reef. PLoS ONE 8:e58447

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Veron JEN (2000) Corals of the world. Australian Institute of Marine Science, Australia

    Google Scholar 

  • Veron JEN (2013) Overview of the taxonomy of zooxanthellatex Scleractinia. Zool J Linn Soc 169:485–508

    Article  PubMed  PubMed Central  Google Scholar 

  • Veron JEN, Pichon M (1976) Scleractinia of Eastern Australia. Australian Institute of Marine Science, Australia

    Book  Google Scholar 

Download references

Acknowledgements

This study was supported by the Department of Science and Technology-Philippine Council for Agriculture, Aquatic and Natural Resources Research and Development, the Department of Environment and Natural Resources-Biodiversity Management Bureau, and the University of the Philippines Marine Science Institute. Darryl Valino, Mikhael Tañedo, Romer Albino, Inggat Casilagan, Joey Cabasan, David Siquioco, and Lovely Heyres assisted with field collections.

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Correspondence to Andrew F. Torres.

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Topic Editor Dr. Line K. Bay

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Torres, A.F., Ravago-Gotanco, R. Rarity of the “common” coral Pocillopora damicornis in the western Philippine archipelago. Coral Reefs 37, 1209–1216 (2018). https://doi.org/10.1007/s00338-018-1729-3

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